By Sergio Decherchi In Scripts and Utilities 440 downloads
This script loads a .off file and visualize it. By default the surface is semi-transparent in order to see cavities. If the cavities loading is enabled, grid points in cavities are shown together with a scalar indicating the ratio of the cavity volume and the volume of the water molecule approximated as a sphere with a radius of 1.4 Angstrom. By indicating the name of the NanoShaper executable both computation and visualization can be done in one single command.